So I un install the game and re install it.
So i delete all my save's and check to see if theres a problem with the game. all the way back to the first save after i left the starting planet.
I have done this many times with 0 issues. so i delete the info in HG folder and copy over the correct file from my save folder. So I look in my folder where I keep my Back Up saves i make at various points while playing. I cant progress in any of the missions in my log. NOTHING in my base works!! Nobody talks to me. and even managed to get up to the armor qst line done. I was rather far along in all the story lines. I had many decent ships and a 20 slot A class MT with decent mods on it. Seems like everyone has had one issue or another with quests or bases or whatever.